PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10043387
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 450aa    MW: 50709.1 Da    PI: 6.8348
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10043387genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.7e-11147184441
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
                   k++rr+++NReAAr+sR+RKka++++Le    +L + 
  Lus10043387 147 AKAQRRLAQNREAARKSRLRKKAYVQQLESSRMKLAQL 184
                  799*************************9854444433 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.1E-6144207IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312146190IPR004827Basic-leucine zipper domain
PfamPF001701.1E-7147186IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-6148191No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-7148191No hitNo description
PROSITE patternPS000360151166IPR004827Basic-leucine zipper domain
PfamPF141448.5E-32226301IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
MEQNNSHSDG PEFDFGELEE AIFLQGGVKI RNEERPLREG ADAAAAAGKT LEIMFPSWPM  60
RFQHTCTPTI LPEQQGSSRS GEESTDDDSG SAVNTTTVTT ADQNQHKRSA PPASSSSDHF  120
QQHHQMEISA AVNDKRKVTP LEKSLDAKAQ RRLAQNREAA RKSRLRKKAY VQQLESSRMK  180
LAQLEQELHR ARQQGVFIGA ASGNLSSAAA MFDAEYGRWV EEDLRQMSEL RSALHSQLPD  240
SELREVVERY ICHYDEIFRL KGATAKSDVF HLITGMWCTS AERCFLWMGG FRPSDLIKML  300
ISQLDPLTEQ QVMGIYSLQH STQQAEEALT QGLEQLQHSL VDTIAAPADW MQQMAIALGK  360
VSNLQSFLRQ ADNLRQQTIH HLRRILTARQ AARCFLVIGE YYRRLRALSS LWASRPREVM  420
SEEKSCQMIT SDVQMAQLPP PQHAHFASF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012485104.10.0PREDICTED: transcription factor TGA2-like
SwissprotO241601e-123TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D2SVM80.0A0A0D2SVM8_G
STRINGPOPTR_0009s16590.11e-178(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45553357
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-160bZIP family protein